Soutenance publique de thèse de doctorat en Sciences mathématiques: Williams Dhelonga Biarufu
Jury
Prof. Yves CAUDANO (UNamur), présidentProf. André FÜZFA (UNamur), secrétaireProf. Dominique LAMBERT (UNamur)Dr Jérémy REKIER (Observatoire royal de Belgique et UCLouvain)Prof. Dr Félix FINSTER (Regensburg University)
Résumé
Sonder l'Univers avec un voilier solaire relativiste ou des fermions d’Einstein-DiracL' Univers exerce sur l'homme une curiosité à la fois indéniable et fondamentale. Pour percer les mystères du Cosmos, l’homme est conduit à développer deux grandes stratégies d'investigation : une exploration directe par l'envoie de sondes spatiales, et une exploration indirecte par l’observation des champs électromagnétiques cosmiques, des ondes gravitationnelles ou de particules telles que les fermions.Suivant ces deux stratégie, nous développons dans cette thèse, dans la première approche (consistant à envoyer une sonde spatiale), un modèle cinématique et dynamique relativiste de voiles photoniques (light sails) ayant une réflectivité et une absorbance arbitraires, se déplaçant de manière non rectiligne dans le but d’explorer l’espace interstellaire. Le problème consiste à déterminer la trajectoire de la voile dans un espace-temps de Minkowski, une variété à quatre dimensions. À partir de calculs détaillés, nous obtenons la ligne d’univers de la voile dans le référentiel du laser en fonction du temps propre de la voile.La seconde approche applique le formalisme à deux vecteurs d’état (Two-State Vector Formalism) et les mesures faibles à un cadre cosmologique homogène et isotrope. En couplant les spineurs de Dirac à la gravité classique, nous calculons les valeurs faibles du tenseur énergie-impulsion, de la composante Z du spin ainsi que celles des états purs. Prolongeant les travaux de Finster et Hainzl sur la cosmologie d’Einstein-Dirac, nous montrons que l’expansion accélérée de l’Univers peut être interprétée comme une conséquence de la post-sélection. Nous démontrons également que les mesures faibles peuvent amplifier les signaux au moyen d’un équipement plus simple, grâce à une sélection judicieuse des vecteurs d’état initial et final. En outre, ce procédé met en évidence certaines propriétés géométriques de l'espace tridimensionel du Cosmos, offrant une nouvelle manière d’explorer la structure de l’Univers.Nous examinons également la structure mathématique sur laquelle repose l’équation de Dirac au-delà de la dimension et de la signature habituelles. Cela révèle une riche symétrie interne et donne lieu à une représentation diagrammatique particulièrement esthétique.
Abstract
Probing the Universe with a Relativistic Light Sail or Einstein-Dirac FermionsHumanity’s profound curiosity about the cosmos is both undeniable and fundamental. To demystify the Universe, humankind is compelled to develop both direct and indirect probing strategies: direct exploration through physical visits using probes, and indirect exploration by observing cosmic electromagnetic field, gravitational waves and particles such as fermions.Building on these two strategies, this thesis proposes two distinct approaches to probing the Universe. In the first approach, we present a relativistic kinematic and dynamic model of light sails with arbitrary reflectivity and absorptance, undergoing non-rectilinear motion as a method of interstellar exploration. The problem involves solving for the trajectory of the sail in a 4-dimensional Minkowski spacetime manifold. By detailed computation, we derive the worldline of the sail in the laser’s frame in the sail’s proper time.The second approach applies the Two-State Vector Formalism and weak measurements to a spatially homogeneous and isotropic cosmological framework. Coupling Dirac spinors with classical gravity, we compute weak values of the energy-momentum tensor, the Z-component of spin, and pure states. Extending the work of Finster and Hainzl on Einstein-Dirac cosmology, we demonstrate that the Universe’s accelerated expansion can be interpreted as a consequence of post-selection. We show also that weak measurements can amplify signals with simpler equipment by carefully selecting initial and final state vectors. This process also reveals geometric properties of the spacelike three-manifold of the Cosmos, opening new way on probing the structure of the Universe.We explore also the mathematical framework underlying the Dirac equation beyond the standard dimension and signature. This enterprise reveals its symmetric rich properties and aesthetic diagrammatic representation.
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Quantum Horizons: Exploring the Frontiers of Chemistry (Session II)
Two talks will be held:Renato OLARTE HERNANDEZ from UNamur will talk about: "Second Quantization in Quantum Chemistry".He will be followed by the talk of Prof. Marc de WERGIFOSSE (UCLouvain) entitled "Natural Response Orbitals and the RespA Procedure".
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Soutenance publique de thèse de doctorat en sciences physiques - Emerick GUILLAUME
JuryProf. Yoann OLIVIER (UNamur), PresidentProf. Luc HENRARD (UNamur), SecretaryProf. Ken HAENEN (UHasselt)Prof. Danny VANPOUCKE (UHasselt)Prof. Paulius POBEDINSKAS (UHasselt)Prof. Rozita ROUZBAHANI (UHasselt)Prof. Audrey VALENTIN (Université Sorbonne Paris-Nord)Prof. Anke KRÜGER (Universität Stuttgart)Dr Michael SLUYDTS (ePotentia)RésuméRadical attack and recombination are thought to play an important role in the atomic-scale mechanisms driving the growth of diamond. Unfortunately, accurate ab-initio calculations of the growth mechanisms are scarce. This work presents an analysis of growth-related reactions, including the ones involving hydrogen and methyl radicals, on (100), (111) and (113) H-passivated diamond surface. The reactions investigated here include the migrations of different species. The reactions between the intermediate growth steps of the nucleation (including some etching mechanisms) are characterised through their reaction rate coefficients.The (climbing) nudged elastic band method is used to identify the minimum energy path of the reactions, which reveals either a tight or a loose transition state depending on the presence or absence of an energy barrier. Following the determination of the energy profile a given reaction, the vibrational spectra of its reactants, products and transition state is computed to derive its reaction rate coefficient by means of (variational) transition state theory calculations. These temperature- and pressure-dependent reaction rate coefficient have great potential: using multi-scale methods (e.g. kinetic Monte-Carlo), they provide insights into the best conditions to grow single crystal diamond. Temperature, pressure and radical densities in the reactor influence both the rate and quality of the growth, and the versatility of the results presented herein allows to account for these factors. The approach used in this work can be generalised to any crystallographic orientation of diamond, and even to other semiconductor surfaces.
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Soutenance publique de thèse de doctorat en sciences biologiques - Alexis CHASSEUR
JuryProf. Thierry ARNOULD (UNamur), présidentProf. Benoît MUYLKENS (UNamur), secrétaireProf. Sébastien PFEFFER (Université de Strasbourg)Prof. René REZSOHAZY (UCLouvain)Prof. Catherine SADZOT (ULiège)Prof. Dr Benedikt KAUFER (Freie Universität Berlin)Prof. Carine VAN LINT (ULB)Dr Damien COUPEAU (UNamur),RésuméLes ARN existent sous diverses formes dans la cellule : les ARN messagers (ARNm), les ARN de transfert (ARNt) et ribosomaux (ARNr) et les petits ARN régulateurs (ARNsn, miARN, snoARN). Les ARN circulaires (ARNcirc) jouent également un rôle clé en servant de matrice pour la traduction, en inhibant des ARN régulateurs par interaction de séquence, ou en recrutant des protéines pour moduler leur activité.L’herpèsvirus des gallinacés, plus connu sous le nom de virus de la maladie de Marek (MDV), provoque un lymphome agressif chez le poulet, entrainant sa mort dans un délai de quelques semaines. Ceci est dû aux nombreux facteurs de virulence qu’il produit. Notamment, MDV produit un facteur de transcription, Meq, qui induit la transformation des cellules dans lesquelles le gène est exprimé. Ce projet de thèse s’intéresse à un ARNcirc dérivé de ce gène.Cette étude a d'abord identifié de nombreux ARNcirc encodés par MDV, notamment lors de la lymphomagenèse, à partir de quatre principaux locus viraux : l'OriLyt, vTR, LAT et Meq. Le développement du programme vCircTrappist a montré que des virus apparentés encodent également des ARNcirc similaires, reliant la circularisation des transcrits viraux à un mécanisme inconnu.Focalisée sur circMeq, l'étude a révélé que cet ARNcirc atténue la virulence de MDV, en contraste avec le rôle précédemment attribué à Meq. Cette conclusion repose sur l'inhibition sélective de circMeq ou de linMeq via des mutations dans le génome viral.Cette thèse a révélé des propriétés insoupçonnées du gène Meq, ouvrant la voie à des recherches futures, notamment des expériences in vivo pour explorer le rôle de circMeq dans la transmission de MDV.
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Soutenance publique de thèse de doctorat en sciences mathématiques - Jean-François de KEMMETER
JuryProf. Alexandre MAUROY (UNamur), présidentProf. Timoteo CARLETTI (UNamur), promoteur et secrétaireProf. Malbor ASLLANI (Florida State University)Prof. Renaud LAMBIOTTE (Oxford Mathematical Institute)Prof. Filippo COLOMO (Università degli studi di Firenze)Prof. Christian WALMSLEY HAGENDORF (UCLouvain)RésuméFlocks of birds, people clapping in unison or the World Wide Web are some instances of complex systems in which a large number of entities interact with each other and produce some emergent phenomena. In this thesis, we pay special attention to two such complex systems, namely crowded random walks on networks, and domino tilings and vertex models. In recent years, networks and generalizations thereof have emerged as an efficient tool to model the pattern of interactions among a set of entities. Examples include social networks, transportation networks and ecological networks. A cornerstone of network science is the interplay between network structure and dynamics on networks. Among those dynamical processes, random walks play a central role. In the first part of this thesis, we study the dynamics of multiple random walkers moving across the nodes of the network, assuming the latter to be endowed with limited available space. We characterize, both analytically and numerically, the stationary states, and we subsequently apply the latter framework to a real ecological network. In the second part of the thesis, we move on to the study of the arctic curve phenomenon arising in domino tilings of double Aztec rectangles and configurations of the six-vertex model with partial domain wall boundary conditions. The latter two models manifest in the scaling limit a spatial phase separation between ordered regions and a central disordered region. We compute the arctic curve of the aforementioned models using the tangent method.
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Défense publique de thèse - Nadine HAMDAN
Consanguinity refers to the offspring produced from the union of two closely related individuals who share at least one common ancestor (Temaj et al. 2022). Some communities have high rates of consanguineous marriages, especially in the Middle East, where consanguinity rates of first-cousin marriages vary in Gulf countries from 20 to 50 % (Ben-Omran et al. 2020). This high rate of consanguineous marriages is due to cultural, geographical, historical, financial, political, or religious reasons (Temaj et al. 2022) (Ben-Omran et al. 2020).Consanguinity increases the chance/risk/probability to be homozygous for rare mutations in the general population (Temaj et al. 2022). These mutations can cause recessive autosomal pathologies that may be extremely rare known as rare diseases (Temaj et al. 2022). In many Middle Eastern populations, consanguineous relationships are very common, providing geneticists with a valuable source for discovering "new" genes and identifying their functions (Ben-Omran et al. 2020). Identifying these genes can help carry out diagnostic and predictive tests (genetic counseling) in affected families (Ben-Omran et al. 2020; Temaj et al. 2022). In some cases, understanding the pathophysiological mechanisms involved in diseases can also lead to new therapeutic strategies (Salzberg 2018).In recent years, the development of Next Generation Sequencing (NGS) technologies has led to a faster identification of genes involved in rare diseases (Lal et al. 2016). Sequencing the entire genome (Whole Genome Sequencing, WGS) or the exome (Whole Exome sequencing, WES) can be achieved quickly and inexpensively (Salzberg 2018).Rare diseases are Mendelian monogenic diseases, that result from specific pathogenic variants in single genes, called germline mutations. These mutations occurring in the coding or the non-coding regions in the gene, can be inherited in dominant, recessive, or X-linked transmission modes within a family (Tukker et al. 2021). Coding sequences, known as exons, directly encode the amino acid sequence of proteins essential for various cellular functions, including enzymatic reactions, cell signaling, and structural support. Pathogenic variants within coding sequences can lead to significant disruptions and alterations in the protein structure, function, and stability (Li et al. 2013). However non-coding sequences that represents around 98% of the entire human genome, include introns, enhancers, promotors, and regulatory elements that regulate genes’ expression. The presence of a pathogenic variant in one of these regions can alter mRNA processing and gene expression and disrupt the delicate balance of gene regulation. REFERENCEWhile coding regions, constitutes around 1 to 2% of the entire genome, , the precise functions of non-coding regions are still unraveled (Moyon et al. 2022).Our project has two main objectives.A) Firstly, to identify the pathogenic variant responsible for a syndromic neurodevelopmental disorder (NDD) in a young boy from a consanguineous Lebanese family. This step was achieved in 2020 and our results were published in Clinical Genetics. Indeed, a homozygous stop gain mutation in the BOD1 gene (p.R151*) was identified and was shown to be involved in the disease observed in this family. BOD1 is a crucial protein that inhibits the PP2A-B56 phosphatase at the kinetochore, which regulates the recruitment of various proteins (such as PLK1: Polo like Kinase 1 ) to ensure proper chromosome orientation during mitosis (Porter et al. 2013). Additionally, BOD1 is a part of a cytosolic variant of the SET1B/COMPASS complex, which affects the expression of genes related to fatty acid metabolism (Wang et al. 2017). Studies in Drosophila have shown that BOD1 depletion in neurons causes synapse morphological abnormalities and learning defects (Esmaeeli-Nieh et al. 2016). Moreover, BOD1 was described to be responsible for ataxic-like behaviors in mice with conditional in what tissue? Knock-Out (KO) of exon 2 of this gene in the lobes IV-V of the cerebellum (Liu et al. 2022). On another note, a homozygous nonsense mutation in BOD1 gene (p.R112*) was identified in two related Iranian females, who were diagnosed with moderate form of ID (Intellectual Disability) and primary/secondary amenorrhea (Esmaeeli-Nieh et al. 2016).B) Secondly, we aimed to study the effect of the p.R151* mutation in BOD1 gene on protein expression. To achieve this, we used the CRISPR-Cas9 genome editing technique to create a knock-in (KI) of the mutation in HEK293T cells. We then analyzed the effect of this mutation on the expression of Bod1 protein using Western blot technique. Furthermore, we wanted to investigate the physiological and developmental function of the BOD1 gene. For this purpose, we have generated a conditional knock-out cKO mouse model.
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Space Week Namur
Entrez dans l’univers fascinant de la Space Week Namur 2024 !
Préparez-vous à un voyage extraordinaire à travers les étoiles et les mystères de l’espace. Voici le programme de cette semaine cosmique : Expositions “Objectif étoiles” : Avec cette exposition d'astrophotographie, plongez dans un océan d’étoiles scintillantes et laissez vous émerveiller par les secrets de notre galaxie. “Stellar Scape” : Une aventure immersive où l'art et les sciences vous transporteront au cœur des paysages stellaires, où chaque étoile raconte une histoire. Événements "Mission ISS : Improvisation Space Station" : Un spectacle de l’ImproNam, le kot-à-projet namurois d’improvisation théâtrale."Rencontre des astronautes" : Une chance unique pour les jeunes explorateurs de rencontrer des héros de l’espace et d’écouter leurs récits d’aventures au-delà de notre monde. “Mercredi des Savoirs” : Des ateliers interactifs pour les jeunes esprits curieux, prêts à découvrir les merveilles de la science.“Chill & Sciences” : Un moment convivial pour discuter avec un chercheur et un artiste, et explorer les mystères de l’univers. "Premier contact - Arrival" : Un ciné-rencontre proposé par le Caméo et Le Pavillon. "5 ans de l'Observatoire astronomique Antoine Thomas"Visites Visite de l’Observatoire astronomique Antoine Thomas : Une expédition guidée pour percer les secrets de l’observation astronomique et contempler les merveilles du cosmos. Ne manquez pas cette opportunité de plonger dans un univers fantastique et de partager des moments inoubliables avec des passionnés de tous horizons. Rendez-vous à Namur du 7 au 12 octobre 2024 pour la Space Week ! 🚀✨
Cliquez ici pour télécharger le programme et pour vous inscrire aux activités
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Soutenance publique de thèse de doctorat en Sciences chimiques - Amélie MAERTENS
Jury
Prof. Benoît CHAMPAGNE (UNamur), présidentProf. Carmela APRILE (UNamur), secrétaireProf. Eric GAIGNEAUX (UCLouvain)Prof. Sonia FIORILLI (Politecnico di Torino)Prof. Wouter MARCHAL (UHasselt)
Abstract
Heterogeneous acid catalysts became over the years essential to our modern industrial world. Among the possible forms of solid materials with acidic properties, porous silica-based structures embedding active single-sites showed highly promising catalytic activity for various reactions. The insertion of heteroelements inside the SiO2 network is known to introduce a combination of Brønsted and Lewis acid sites which depends on the nature of the element and influences the catalytic properties of the solid. The present thesis investigates the link between the Brønsted/Lewis acid balance introduced by different elements (Al, Ga, In, Ti, Zr, Hf) inserted or finely dispersed in/onto the structure of extra-small silica nanospheres and the catalytic performances of the solids for two distinct biomass derivatives valorization reactions (i.e. conversion of glycerol to solketal and of ethyl levulinate to γ-valerolactone).The optimizations of the syntheses were particularly focusing on the insertion of the element inside the SiO2 matrix to maximize the number of acid sites. In-depth characterizations were conducted on the different substituted nanospheres to probe their morphological, structural, and textural features. A special attention was dedicated to the characterization of the surface acidity. These results were put into perspective with the catalytic performances of the materials. At the end of the investigations, we were able to explain the difference in terms of catalytic activity between the different studied solids and identify the optimal acid properties for the targeted reactions. The stability and recyclability of the best working solids were also assessed, an acute tuning of reaction conditions enabled to reach significatively high conversions, and their performances were tested in challenging conditions (i.e. close to crude feedstock).The knowledge unveiled through these investigations will give precious insight to design new silica-based catalysts with the appropriate acidity for a wide variety of acid-catalyzed reactions.
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Soutenance publique de thèse de doctorat en Sciences chimiques - Gaetano RICCI
Jury
Prof. Catherine MICHAUX (UNamur), PrésidenteProf. Yoann OLIVIER (UNamur), secrétaireProf. Piotr DE SILVA (Technical University of Denmark)Prof. Daniel ESCUDERO MASA (KULeuven)Prof. Benoît CHAMPAGNE (UNamur)Prof. Luc HENRARD (UNamur)
Abstract
Organic Light Emitting Diodes (OLEDs) are now a well-established technology in modern electronic devices, from flexible TV screens to lighting applications. Each time we use our smartphone, billions of tiny molecules are electrically stimulated to emit the colorful light reaching our eyes. The ability of these molecules to convert electricity into light is the core principle of an OLED, and understanding the mechanisms behind this process can help improve their performance.Recently, two new families of triangular-shaped organic molecular systems, known as Multi-Resonant (MR) and Inverted Singlet-Triplet (INVEST) compounds, have shown promising features for OLED applications.In my PhD research, I used computational chemistry to explore the quantum mechanical effects that define the peculiar features of these systems.The first part of my thesis focused on identifying the correct computational protocol to properly describe the energy and nature of the singlet and triplet excited states of the INVEST compounds, highlighting the importance of methods including double excitations. With this information in our hands, we combined quantum chemistry and group theory to design new light-emitting INVEST compounds. Finally, we applied both static and dynamic approaches to describe the spin conversion processes in MR and INVEST systems, providing a comprehensive picture of their electronic and photophysical properties for next generation OLED applications.
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Soutenance publique de thèse de doctorat en Sciences biologiques - Pauline CHERRY
Jury
Prof. Xavier DE BOLLE (UNamur), présidentProf. Jean-Yves MATROULE (UNamur) secrétaireDr Karrera DJOKO (Durham University)Dr Soufian OUCHANE (Paris-Saclay University)Dr Rob VAN HOUDT (SCK-CEN)
Abstract
The copper tolerance of the free-living bacteria Caulobacter crescentus depends on its dimorphic cell cycle. The sessile stalked cell detoxifies and effluxes copper through the multicopper oxidase PcoA and the Cu transporter PcoB respectively, while the swarmer cell senses and swims away from Cu sources. The transcriptional landscape of both morphotypes upon copper excess further confirms this. Among the few genes upregulated in both stalked and swarmer cells under copper excess, the CCNA_00027-00028 operon encodes a TonB-dependent receptor (TbcT) and a 2-oxoglutarate/Fe2+-dependent oxygenase (OxcT), respectively. The deletion of these two genes specifically increases the sensitivity towards Cu in C. crescentus. Interestingly, using a bioinformatics approach, we observed that the tbcT and oxcT genes co-occur in at least 67 % of bacteria containing a tbcT gene, and 88 % of bacteria containing an oxcT gene. The TbcT-OxcT system is not involved in the transport of copper nor the detoxification of copper-induced oxidative stress. Previous studies in C. crescentus and for homologous proteins showed that TbcT seems to be involved in iron import via siderophores, even though C. crescentus does not appear to synthesize siderophores. The overexpression of the tbcT gene appears to enhance the import of iron. OxcT activity is important for copper tolerance, although its specific activity has not yet been deciphered. Based on our results, we demonstrated that proper iron import is crucial for complete Cu tolerance, with the intracellular iron preventing copper accumulation. Taken together, our results argue for a tight coupling between iron and copper homeostasis in the context of copper tolerance.
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Soutenance publique de thèse de doctorat en Sciences géographiques - Jelena LUYTS
Jury
Prof. Nathalie BURNAY (UNamur), présidenteProf. Sabine HENRY (UNamur), secrétaireDr. Florence DE LONGUEVILLE (UNamur)Prof. Nathalie MONDAIN (Université d’Ottawa)Prof. Etienne PIGUET (Université de Neuchâtel)Prof. Sane TIDIANE (Université Assane Seck/Ziguinchor)
Abstract
Recent attention to environmental change has highlighted its impact on rural communities, particularly in Africa, where household-level adaptations play a crucial role in larger societal responses. Current research often overlooks these small-scale, everyday adaptations and how they evolve over time, limiting our understanding of rural communities' dynamic responses to environmental changes. This study focused on households living in rural West Africa, more specifically in the region of Saint-Louis in Senegal. To capture the complexity of the household adaptation journeys, the structured timeline mapping methodology was developed, which consists of completing timelines during interviews. Timelines were collected from 39 individuals in 17 households to explore how families perceive and adapt to environmental shifts. In addition, this research reflected on the added value and necessity of interviewing multiple household members to capture diverse lived experiences and ensure a comprehensive household-level perspective.Analysis of the data categorized the adaptation journeys into four typological groups reflecting different sensitivities and adaptive capacities: (1) diversified adjusters, (2) system maintainers, (3) environmental independence strivers, and (4) opportunity-driven adapters. All groups have differentiated responses to similar environmental changes, with differences in the temporality of the response, differences in the types of adaptations, and differences in the amount and diversity of adaptations. These differences result in resilience that evolves unevenly over time. Understanding these varied adaptation pathways lead to formulate policy recommendations aimed at improving adaptive capacity, resilience, and sustainable livelihoods.
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5 ans de l'Observatoire Antoine Thomas s.j.
Depuis son inauguration en 2019, l’observatoire astronomique de l’UNamur a déployé un programme pédagogique et de médiation scientifique ouvert à toutes et à tous, avec l’ambition de faire découvrir les sciences par le prisme de l’observation des merveilles du ciel. 5 ans plus tard, le pari est réussi ! La petite équipe qui anime les lieux multiplie les collaborations et les activités proposées aux étudiantes et aux étudiants, aux écoles et au grand public. Cet automne, l’Observatoire astronomique célébrera l’empreinte durable qu’il a construite dans les yeux et les cœurs de son public en fêtant son 5e anniversaire. Une occasion de rassembler la communauté qui s’est développée autour de ses projets passés, présents et futurs !
Au programme
11H-16H : Visites de l’observatoireUNamur – Faculté des sciences12H-18H : Possibilité de visiter de l’exposition Stellar ScapeLe Pavillon de la Citadelle de Namur18H30 : Séance académique et réceptionUNamur – Faculté des sciences (S01)Inscriptions demandées via billetweb :
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